Segmentation Creation

createEmptySegmentationForViewport

is now createLabelmapForViewport to align with other segmentation creation methods.

Run it using commandsManager.runCommand('createLabelmapForViewport', {viewportId}).

createSegmentationForDisplaySet

is now -> createLabelmapForDisplaySet

Since we are moving towards segmentations be contours as well, this is renamed to clearly state the purpose. Since OHIF 3.9 introduced Stack Segmentation support, we no longer generate a volume-based labelmap or convert the viewport to a volume viewport by default. Our default creation is now stack-based.

API Changes

• createSegmentationForDisplaySet has been renamed to createLabelmapForDisplaySet.
• Pass a displaySet object instead of a displaySetInstanceUID. This change enhances type safety and flexibility, accommodating future updates to the displaySetService.

Before (OHIF 3.8)

async createSegmentationForDisplaySet(
  displaySetInstanceUID: string,
  options?: {
    segmentationId: string;
    FrameOfReferenceUID: string;
    label: string;
  }
): Promise<string>

After (OHIF 3.9)

// Method 1: Display Set Based
async createLabelmapForDisplaySet(
  displaySet: DisplaySet,
  options?: {
    segmentationId?: string;
    label: string;
    segments?: {
      [segmentIndex: number]: Partial<Segment>
    };
  }
): Promise<string>

Migration Examples

// Before - OHIF 3.8
const segmentationId = await segmentationService.createSegmentationForDisplaySet(
  displaySetInstanceUID,
  {
    label: 'My Segmentation'
  }
);

// After - OHIF 3.9
// Option 1: If you have a display set UID
const displaySet = displaySetService.getDisplaySetByUID(displaySetInstanceUID);

const segmentationId = await segmentationService.createLabelmapForDisplaySet(
  displaySet,
  {
    label: 'My Segmentation'
  }
);

---

createSegmentationForRTDisplaySet

Before (OHIF 3.8)

async createSegmentationForRTDisplaySet(
  rtDisplaySet,
  segmentationId?: string,
  suppressEvents = false
): Promise<string>

After (OHIF 3.9)

async createSegmentationForRTDisplaySet(
  rtDisplaySet,
  options: {
    segmentationId?: string;
    type: SegmentationRepresentations;  // not required, defaults to Contour
  }
): Promise<string>

Migration Examples

if you were not passing segmentationId, you don't need to change anything

// Before - OHIF 3.8
const segmentationId = await segmentationService.createSegmentationForRTDisplaySet(
  rtDisplaySet
);

// After - OHIF 3.9
const segmentationId = await segmentationService.createSegmentationForRTDisplaySet(
  rtDisplaySet,
);

if you were passing segmentationId, you need to update the API to pass an options object and set the segmentationId in there.

// Before - OHIF 3.8
const segmentationId = await segmentationService.createSegmentationForRTDisplaySet(
  rtDisplaySet,
  'custom-id',
);
// After - OHIF 3.9
const segmentationId = await segmentationService.createSegmentationForRTDisplaySet(
  rtDisplaySet,
  {
    segmentationId: 'custom-id',
    type: csToolsEnums.SegmentationRepresentations.Contour
  }
);

---

createSegmentationForSEGDisplaySet Changes

Before (OHIF 3.8)

async createSegmentationForSEGDisplaySet(
  segDisplaySet,
  segmentationId?: string,
  suppressEvents = false
): Promise<string>

After (OHIF 3.9)

async createSegmentationForSEGDisplaySet(
  segDisplaySet,
  options: {
    segmentationId?: string;
    type: SegmentationRepresentations; // not required, defaults to Labelmap
  }
): Promise<string>

Migration Examples

1. Basic Usage Update

   // Before - OHIF 3.8
   const segmentationId = await segmentationService.createSegmentationForSEGDisplaySet(
     segDisplaySet
   );
   // After - OHIF 3.9
   const segmentationId = await segmentationService.createSegmentationForSEGDisplaySet(
     segDisplaySet,
     {
       type: csToolsEnums.SegmentationRepresentations.Labelmap
     }
   );

2. Custom Configuration

   // Before - OHIF 3.8
   const segmentationId = await segmentationService.createSegmentationForSEGDisplaySet(
     segDisplaySet,
     'custom-id',
     false
   );
   // After - OHIF 3.9
   const segmentationId = await segmentationService.createSegmentationForSEGDisplaySet(
     segDisplaySet,
     {
       segmentationId: 'custom-id',
       type: csToolsEnums.SegmentationRepresentations.Labelmap
     }
   );

---